The single-most relevant piece of advice, though, is to think carefully who you are writing for. Many, possibly most, research students write just for their supervisor. That is a big mistake: yes, you need to convince him or her of the important of what you are doing, but they are not the ultimate yardstick – and it’s too bad for them if they don’t know that. you should really have a broader, mostly sympathetic, audience in mind when you write, and should probably also diversify your imaginary audience a bit.
Although a book and not an article, I add this post in the Energy section, because it is more related to studies than reading.
Intelligent Research Design is a book offering advice for doctoral researchers at the beginning of their research. While short, the material is condensed and it takes a while to digest. Bob Hancké offers a guide to construct a thesis, from the research question to research design, methodology and presentation.

The writing is easy to follow, although the material covered is difficult. It teaches the reader how science is created, the benchmarks of an academic paper and the questions we should ask when reading an article, revealing the potential gaps.
Bob Hancké is Reader in European Political Economy at the London School of Economics and Political Science and he draws for his decades of teaching experience and grading to show how a good academic paper should look like.
I enjoyed reading the book and I could easily see the points that Hancké wanted to make. I would have liked to recommend the book to my younger me, writing the Masters dissertation.